BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB017D02SP1|AL427149
(927 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig863 1137 0.0
>3x_Contig863
Length = 2811
Score = 1137 bits (571), Expect = 0.0
Identities = 588/595 (98%), Gaps = 1/595 (0%)
Strand = Plus / Plus
Query: 326 cctagagttaggatattttgttgaaagagactttcagcacttattgatataaatatcatc 385
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 cctagagttaggatattttgttgaaagagactttcagcacttattgatataaatatcatc 63
Query: 386 atctctttcttcttctgatttcagggatactatcagttcaaataggtagaaccggtaaag 445
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 atctctttcttcttctgatttcagggatactatcagttcaaataggtagaaccggtaaag 123
Query: 446 taatagtcaagttttcaagcagtcatggtaagtgttacagttcttggctcatctggtggt 505
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 taatagtcaagttttcaagcagtcatggtaagtgttacagttcttggctcatctggtggt 183
Query: 506 attggtcaaccactttcgttgttgttgaaactagaccctcatgtatcaagtttgagattg 565
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 attggtcaaccactttcgttgttgttgaaactagaccctcatgtatcaagtttgagattg 243
Query: 566 tacgatttgaagctgtcccacggtaatgctaccgattrgtctcaaatcgvcrctvactcc 625
||||||||||||||||||||||||||||||||||||| |||||| |||| | || |||||
Sbjct: 244 tacgatttgaagctgtcccacggtaatgctaccgatttgtctcatatcgacactaactcc 303
Query: 626 acgtctgarggtttcaataccgcagagattggtcaagcgttgaaaggtgcccaattggtc 685
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 acgtctgaaggtttcaataccgcagagattggtcaagcgttgaaaggtgcccaattggtc 363
Query: 686 ataatcccggccggtattccaaggaagccaggtatgtcacgtgacgacttgttcaagatc 745
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 ataatcccggccggtattccaaggaagccaggtatgtcacgtgacgacttgttcaagatc 423
Query: 746 aacgccaagatcatcaagtctctaactgtgcaaattgctgaacatgcaccagatgccaga 805
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 aacgccaagatcatcaagtctctaactgtgcaaattgctgaacatgcaccagatgccaga 483
Query: 806 atccttgtcatttcaaacccagtgaactcgttgggttccaattgtttacgaaactttgca 865
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 484 atccttgtcatttcaaacccagtgaactcgtt-ggttccaattgtttacgaaactttgca 542
Query: 866 aagcatgggcaagttccaagccggtaaggttatgggtatcactactttggatatc 920
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 aagcatgggcaagttccaagccggtaaggttatgggtatcactactttggatatc 597
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 19,224
Number of Sequences: 1807
Number of extensions: 19224
Number of successful extensions: 2324
Number of sequences better than 1.0e-20: 1
length of query: 927
length of database: 10,358,551
effective HSP length: 16
effective length of query: 911
effective length of database: 10,329,639
effective search space: 9410301129
effective search space used: 9410301129
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)